Cite Us

Please either cite the URL (www.replicationdomain.org) or the following manuscript that describes the creation and usage of this web site:

Nodin Weddington, Alexander Stuy, Ichiro Hiratani, Tyrone Ryba, Tomoki Yokochi, and David M. Gilbert, "ReplicationDomain: a visualization tool and comparative database for genome-wide replication-timing data," BMC Bioinformatics (2008) 9:530

Here are the papers describing the data sets displayed in the public domain:

MOUSE

Ichiro Hiratani, Tyrone Ryba, Mari Itoh, Tomoki Yokochi, Michaela Schwaiger, Chia-Wei Chang, Yung Lyou, Tim M. Townes, Dirk Schübeler, David M. Gilbert, "Global Reorganization of Replication Domains During Embryonic Stem Cell Differentiation," PLoS Biology (2008) 6:e245

DROSOPHILA

Schwaiger M, Stadler MB, Bell O, Kohler H, Oakeley EJ, Schübeler D. Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome. Genes Dev. (2009) 23:589-601.