Data Set Details

Owner:David Gilbert
Species:Mus musculus
Chip ID (Array) / Flow Cell ID-Lane# (Sequencing):4180202&4181802_TT2NSMockCGHRT
Order ID:10355
Cell Line / Cell Source / Patient:TT2G9aflox/del
Differentiation State / Cell Type:NPC/ASd9
Array Design Name:2006-07-26_MM8_WG_CGH
Max Y Scale (Float, 1.0 - 10.0):2.5
Replicates:An average of replicates
Data Type:RT
Data Format:Positive and Negative Data Values
Comments:2006-07-26_MM8_WG_CGH: CGH design for whole mouse genome (mm8; NCBI Build 36). Probes selected from mm8_tiling database using 5250 bp interval and 500 bp window. Isothermal probes with min length of 50 bp and max length of 75 bp and target Tm of 76C. Cycle restricted to 148 synthesis cycles. Interval spacing: 5756 bp (mean); 5782 bp (median).
Partial Genome Dataset?:No
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Citation:Yokochi T, Poduch K, Ryba T, Lu J, Hiratani I, Tachibana M, Shinkai Y, Gilbert DM (2009) G9a selectively represses a class of late-replicating genes at the nuclear periphery. Proc Natl Acad Sci USA 106:19363-19368.
Data Security Level:Public

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