|
|
Data Set Details| Internal: | No | | Data Security Level: | Public | | File Name: | RD_D3ESC_AffyExpr.txt | | Data Set ID: | Int16688736 | | Company: | Affymetrix | | Build: | MM8 | | OID: | D3ESC2006x3_PA | | Chip ID: | D3ESC2006x3_PA_Affy | | Cell Line: | D3 | | Differentiation State: | ESC | | Array Design Name: | Mouse Genome 430 2.0 | | Reference: | Hiratani I, Ryba T, Itoh M, Yokochi T, Schwaiger M, Chang CW, Lyou Y, Townes TM, Schübeler D, Gilbert DM (2008) Global reorganization of replication domains during embryonic stem cell differentiation. PLoS Biology 6:e245. | | Comments: | Affymetrix GeneChip MOE 430 2.0:
45,037 probe sets analyze the expression level of over 39,000 transcripts and variants from over 34,000 well characterized mouse genes with overlap. After exclusion of overlap and non-RefSeq genes, probe sets that correspond to 15,143 unique mouse mm8 RefSeq genes were selected, assigned mm8 genome coordinates, and PLIER (Probe Logarithmic Intensity Error algorithm)-normalized signal intensity values are presented. Present (transcriptionally active) and absent (inactive) calls are generated by MAS5.0 (Affymetrix).
| | Data Type: | Transcription | | Entry ID: | ihiratani | | Date Entered: | January 8, 2009 |
|
|
|
